Record Information
Version2.0
Creation Date2009-06-22 16:08:37 UTC
Update Date2014-12-24 20:24:39 UTC
Accession NumberT3D1801
Identification
Common NamePhenacyl bromide
ClassSmall Molecule
DescriptionPhenacyl bromide is an organobromide compound. It is a powerful lachrymator as well as a useful precursor to other organic compounds. In particular, henacyl bromide can be used for the identification of organic acids via their conversion to crystalline phenacyl esters. Phenacyl bromide can also be used for the determination of global DNA methylation by reversed phase HPLC with spectrofluorimetric detection. It has also been used as a protein modification or labeling agent for the selective modification of cysteine residues in a number of enzymes for biochemical studies. It is a white solid that reacts slowly with metals causing mild corrosion. It is combustible and may burn but does not ignite readily. When heated, vapors may form explosive mixtures with air.
Compound Type
  • Aromatic Hydrocarbon
  • Bromide Compound
  • Ester
  • Industrial/Workplace Toxin
  • Ketone
  • Lachrymator
  • Organic Compound
  • Organobromide
  • Synthetic Compound
Chemical Structure
Thumb
Synonyms
Synonym
.alpha.-bromoacetophenone
.omega.-bromacetophenone
.omega.-bromoacetophenone
2-Bromo-1-phenylethanone
2-Bromoacetophenone
a-bromoacetophenone
Acetophenone, 2-bromo- (8CI)
Alpha-bromoacetophenone
Benzoylmethyl bromide
Bromoacetophenone
Bromomethyl phenyl ketone
Halomethyl Phenyl Ketone deriv. 23
Omega-bromacetophenone
Omega-bromoacetophenone
Stauffer 4644
Chemical FormulaC8H7BrO
Average Molecular Mass199.045 g/mol
Monoisotopic Mass197.968 g/mol
CAS Registry Number70-11-1
IUPAC Name2-bromo-1-phenylethan-1-one
Traditional Namephenacyl bromide
SMILESBrCC(=O)C1=CC=CC=C1
InChI IdentifierInChI=1S/C8H7BrO/c9-6-8(10)7-4-2-1-3-5-7/h1-5H,6H2
InChI KeyInChIKey=LIGACIXOYTUXAW-UHFFFAOYSA-N
Chemical Taxonomy
Description belongs to the class of organic compounds known as alkyl-phenylketones. These are aromatic compounds containing a ketone substituted by one alkyl group, and a phenyl group.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbonyl compounds
Direct ParentAlkyl-phenylketones
Alternative Parents
Substituents
  • Alkyl-phenylketone
  • Aryl alkyl ketone
  • Benzoyl
  • Benzenoid
  • Monocyclic benzene moiety
  • Alpha-haloketone
  • Organic oxide
  • Hydrocarbon derivative
  • Organobromide
  • Organohalogen compound
  • Alkyl halide
  • Alkyl bromide
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External Descriptors
Biological Properties
StatusDetected and Not Quantified
OriginExogenous
Cellular Locations
  • Membrane
Biofluid LocationsNot Available
Tissue LocationsNot Available
PathwaysNot Available
ApplicationsNot Available
Biological RolesNot Available
Chemical RolesNot Available
Physical Properties
StateSolid
AppearanceWhite crystals, greenish on exposure to light. Easily volatile with steam and soluble in organic solvents.
Experimental Properties
PropertyValue
Melting Point50.5°C
Boiling Point250°C
SolubilityNot Available
LogPNot Available
Predicted Properties
PropertyValueSource
Water Solubility0.32 g/LALOGPS
logP2.14ALOGPS
logP2.25ChemAxon
logS-2.8ALOGPS
pKa (Strongest Acidic)15.5ChemAxon
pKa (Strongest Basic)-7.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area17.07 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity44.2 m³·mol⁻¹ChemAxon
Polarizability16.49 ųChemAxon
Number of Rings1ChemAxon
Bioavailability1ChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleYesChemAxon
Spectra
Spectra
Spectrum TypeDescriptionSplash KeyDeposition DateView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10V, Positivesplash10-0002-0900000000-f43aaeb3a157fc58f5632016-08-03View Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 20V, Positivesplash10-0002-0900000000-fa7f1b7274ff37b5b9db2016-08-03View Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 40V, Positivesplash10-004i-9500000000-e2c4b851750422b24ef32016-08-03View Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10V, Negativesplash10-0002-0900000000-bf88d5a7dcf96607b9542016-08-03View Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 20V, Negativesplash10-0002-1900000000-17e09742ff49997a69dc2016-08-03View Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 40V, Negativesplash10-004i-9200000000-3b50b5874cd98eb50a752016-08-03View Spectrum
MSMass Spectrum (Electron Ionization)splash10-0a4i-9600000000-3437d0f76ecee59a23052014-09-20View Spectrum
1D NMR1H NMR Spectrum (1D, 90 MHz, CDCl3, experimental)Not Available2014-09-20View Spectrum
1D NMR13C NMR Spectrum (1D, 25.16 MHz, CDCl3, experimental)Not Available2014-09-23View Spectrum
Toxicity Profile
Route of ExposureOral (9) ; inhalation (9) ; dermal (9)
Mechanism of ToxicityOrganobromide compounds such as phenacyl bromide are strong alkylating agents. Consequently they can readily modify free thiols (cysteines) and methionine residues of the surfaces of proteins leading to the disruption of enzyme, transporter or membrane functions. One of the most probable protein targets is the TRPA1 ion channel that is expressed in sensory nerves (trigeminal nerve) of the eyes, nose, mouth and lungs. Human liver aldehyde dehydrogenase isozymes E1 and E2 are both completely and irreversibly inactivated by phenacyl bromide. This kind targeted modification may lead to liver toxicity.
MetabolismBromine is mainly absorbed via inhalation, but may also enter the body through dermal contact. Bromine salts can be ingested. Due to its reactivity, bromine quickly forms bromide and may be deposited in the tissues, displacing other halogens. (9)
Toxicity ValuesNot Available
Lethal DoseNot Available
Carcinogenicity (IARC Classification)No indication of carcinogenicity (not listed by IARC). (10)
Uses/SourcesPhenacyl bromide is an industrial and laboratory chemical.
Minimum Risk LevelNot Available
Health EffectsA strong lachrymator. Inhalation, ingestion or skin contact with material may cause severe injury or death. Potentially hepatotoxic. It is not carcinogenic or mutagenic.
SymptomsPhenacyl bromide is a strong lachrymator. Eye exposure produces irritation, characterized by a burning sensation, redness, tearing, inflammation, and possible corneal injury. Causes skin irritation and possible burns. May cause gastrointestinal irritation with nausea, vomiting and diarrhea. Causes respiratory tract irritation.
TreatmentEYES: irrigate opened eyes for several minutes under running water. INGESTION: do not induce vomiting. Rinse mouth with water (never give anything by mouth to an unconscious person). Seek immediate medical advice. SKIN: should be treated immediately by rinsing the affected parts in cold running water for at least 15 minutes, followed by thorough washing with soap and water. If necessary, the person should shower and change contaminated clothing and shoes, and then must seek medical attention. INHALATION: supply fresh air. If required provide artificial respiration.
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
DrugBank IDNot Available
HMDB IDNot Available
PubChem Compound ID6259
ChEMBL IDCHEMBL102953
ChemSpider ID6023
KEGG IDNot Available
UniProt IDNot Available
OMIM ID
ChEBI ID51846
BioCyc IDCPD-4361
CTD IDC013190
Stitch IDPhenacyl bromide
PDB IDNot Available
ACToR IDNot Available
Wikipedia LinkNot Available
References
Synthesis ReferenceNot Available
MSDST3D1801.pdf
General References
  1. Glover GI, Mariano PS, Petersen JR: Reinvestigation of the phenacyl bromide modification of alpha-chymotrypsin. Biochemistry. 1976 Aug 24;15(17):3754-60. [8093 ]
  2. Arabaci G, Yi T, Fu H, Porter ME, Beebe KD, Pei D: alpha-bromoacetophenone derivatives as neutral protein tyrosine phosphatase inhibitors: structure-Activity relationship. Bioorg Med Chem Lett. 2002 Nov 4;12(21):3047-50. [12372498 ]
  3. Yanez Barrientos E, Wrobel K, Lopez Torres A, Gutierrez Corona F, Wrobel K: Application of reversed-phase high-performance liquid chromatography with fluorimetric detection for simultaneous assessment of global DNA and total RNA methylation in Lepidium sativum: effect of plant exposure to Cd(II) and Se(IV). Anal Bioanal Chem. 2013 Mar;405(7):2397-404. doi: 10.1007/s00216-013-6703-x. Epub 2013 Jan 16. [23322354 ]
  4. MacKerell AD Jr, MacWright RS, Pietruszko R: Bromoacetophenone as an affinity reagent for human liver aldehyde dehydrogenase. Biochemistry. 1986 Sep 9;25(18):5182-9. [3768340 ]
  5. Chatterjee T, Edelstein I, Marcus F, Eby J, Reardon I, Heinrikson RL: Identification of the highly reactive sulfhydryl group of pig kidney fructose 1,6-bisphosphatase at cysteine 128. J Biol Chem. 1984 Mar 25;259(6):3834-7. [6323443 ]
  6. Golomb, BA (1999). A Review of the Scientific Literature As It Pertains to Gulf War Illnesses. Volume 2: Pyridostigmine Bromide. Washington, DC: RAND.
  7. Marrs, Timothy T., Robert L. Maynard, and Frederick Sidell, eds. (2007). Chemical Warfare Agents: Toxicology and Treatment. 2nd edition. John Wiley & Sons. [ISBN: 978-0-470-01359-5]
  8. Wikipedia. Phenacyl bromide. Last Updated 19 April 2009. [Link]
  9. International Programme on Chemical Safety (IPCS) INCHEM (1992). Poison Information Monograph for Bromine. [Link]
  10. International Agency for Research on Cancer (2014). IARC Monographs on the Evaluation of Carcinogenic Risks to Humans. [Link]
Gene Regulation
Up-Regulated GenesNot Available
Down-Regulated GenesNot Available

Targets

General Function:
Electron carrier activity
Specific Function:
Not Available
Gene Name:
ALDH2
Uniprot ID:
P05091
Molecular Weight:
56380.93 Da
References
  1. Arabaci G, Yi T, Fu H, Porter ME, Beebe KD, Pei D: alpha-bromoacetophenone derivatives as neutral protein tyrosine phosphatase inhibitors: structure-Activity relationship. Bioorg Med Chem Lett. 2002 Nov 4;12(21):3047-50. [12372498 ]
  2. Glover GI, Mariano PS, Petersen JR: Reinvestigation of the phenacyl bromide modification of alpha-chymotrypsin. Biochemistry. 1976 Aug 24;15(17):3754-60. [8093 ]
  3. Yanez Barrientos E, Wrobel K, Lopez Torres A, Gutierrez Corona F, Wrobel K: Application of reversed-phase high-performance liquid chromatography with fluorimetric detection for simultaneous assessment of global DNA and total RNA methylation in Lepidium sativum: effect of plant exposure to Cd(II) and Se(IV). Anal Bioanal Chem. 2013 Mar;405(7):2397-404. doi: 10.1007/s00216-013-6703-x. Epub 2013 Jan 16. [23322354 ]
  4. MacKerell AD Jr, MacWright RS, Pietruszko R: Bromoacetophenone as an affinity reagent for human liver aldehyde dehydrogenase. Biochemistry. 1986 Sep 9;25(18):5182-9. [3768340 ]
  5. Chatterjee T, Edelstein I, Marcus F, Eby J, Reardon I, Heinrikson RL: Identification of the highly reactive sulfhydryl group of pig kidney fructose 1,6-bisphosphatase at cysteine 128. J Biol Chem. 1984 Mar 25;259(6):3834-7. [6323443 ]
General Function:
Retinal dehydrogenase activity
Specific Function:
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid (By similarity).
Gene Name:
ALDH1A1
Uniprot ID:
P00352
Molecular Weight:
54861.44 Da
References
  1. Arabaci G, Yi T, Fu H, Porter ME, Beebe KD, Pei D: alpha-bromoacetophenone derivatives as neutral protein tyrosine phosphatase inhibitors: structure-Activity relationship. Bioorg Med Chem Lett. 2002 Nov 4;12(21):3047-50. [12372498 ]
  2. Glover GI, Mariano PS, Petersen JR: Reinvestigation of the phenacyl bromide modification of alpha-chymotrypsin. Biochemistry. 1976 Aug 24;15(17):3754-60. [8093 ]
  3. Yanez Barrientos E, Wrobel K, Lopez Torres A, Gutierrez Corona F, Wrobel K: Application of reversed-phase high-performance liquid chromatography with fluorimetric detection for simultaneous assessment of global DNA and total RNA methylation in Lepidium sativum: effect of plant exposure to Cd(II) and Se(IV). Anal Bioanal Chem. 2013 Mar;405(7):2397-404. doi: 10.1007/s00216-013-6703-x. Epub 2013 Jan 16. [23322354 ]
  4. MacKerell AD Jr, MacWright RS, Pietruszko R: Bromoacetophenone as an affinity reagent for human liver aldehyde dehydrogenase. Biochemistry. 1986 Sep 9;25(18):5182-9. [3768340 ]
  5. Chatterjee T, Edelstein I, Marcus F, Eby J, Reardon I, Heinrikson RL: Identification of the highly reactive sulfhydryl group of pig kidney fructose 1,6-bisphosphatase at cysteine 128. J Biol Chem. 1984 Mar 25;259(6):3834-7. [6323443 ]
General Function:
Temperature-gated cation channel activity
Specific Function:
Receptor-activated non-selective cation channel involved in detection of pain and possibly also in cold perception and inner ear function (PubMed:25389312, PubMed:25855297). Has a central role in the pain response to endogenous inflammatory mediators and to a diverse array of volatile irritants, such as mustard oil, cinnamaldehyde, garlic and acrolein, an irritant from tears gas and vehicule exhaust fumes (PubMed:25389312, PubMed:20547126). Is also activated by menthol (in vitro)(PubMed:25389312). Acts also as a ionotropic cannabinoid receptor by being activated by delta(9)-tetrahydrocannabinol (THC), the psychoactive component of marijuana (PubMed:25389312). May be a component for the mechanosensitive transduction channel of hair cells in inner ear, thereby participating in the perception of sounds. Probably operated by a phosphatidylinositol second messenger system (By similarity).
Gene Name:
TRPA1
Uniprot ID:
O75762
Molecular Weight:
127499.88 Da
References
  1. Arabaci G, Yi T, Fu H, Porter ME, Beebe KD, Pei D: alpha-bromoacetophenone derivatives as neutral protein tyrosine phosphatase inhibitors: structure-Activity relationship. Bioorg Med Chem Lett. 2002 Nov 4;12(21):3047-50. [12372498 ]
  2. Glover GI, Mariano PS, Petersen JR: Reinvestigation of the phenacyl bromide modification of alpha-chymotrypsin. Biochemistry. 1976 Aug 24;15(17):3754-60. [8093 ]
  3. Yanez Barrientos E, Wrobel K, Lopez Torres A, Gutierrez Corona F, Wrobel K: Application of reversed-phase high-performance liquid chromatography with fluorimetric detection for simultaneous assessment of global DNA and total RNA methylation in Lepidium sativum: effect of plant exposure to Cd(II) and Se(IV). Anal Bioanal Chem. 2013 Mar;405(7):2397-404. doi: 10.1007/s00216-013-6703-x. Epub 2013 Jan 16. [23322354 ]
  4. MacKerell AD Jr, MacWright RS, Pietruszko R: Bromoacetophenone as an affinity reagent for human liver aldehyde dehydrogenase. Biochemistry. 1986 Sep 9;25(18):5182-9. [3768340 ]
  5. Chatterjee T, Edelstein I, Marcus F, Eby J, Reardon I, Heinrikson RL: Identification of the highly reactive sulfhydryl group of pig kidney fructose 1,6-bisphosphatase at cysteine 128. J Biol Chem. 1984 Mar 25;259(6):3834-7. [6323443 ]
  6. Nilius B, Prenen J, Owsianik G: Irritating channels: the case of TRPA1. J Physiol. 2011 Apr 1;589(Pt 7):1543-9. doi: 10.1113/jphysiol.2010.200717. Epub 2010 Nov 15. [21078588 ]
General Function:
Ubiquitin protein ligase binding
Specific Function:
Constitutively active protein kinase that acts as a negative regulator in the hormonal control of glucose homeostasis, Wnt signaling and regulation of transcription factors and microtubules, by phosphorylating and inactivating glycogen synthase (GYS1 or GYS2), EIF2B, CTNNB1/beta-catenin, APC, AXIN1, DPYSL2/CRMP2, JUN, NFATC1/NFATC, MAPT/TAU and MACF1. Requires primed phosphorylation of the majority of its substrates. In skeletal muscle, contributes to insulin regulation of glycogen synthesis by phosphorylating and inhibiting GYS1 activity and hence glycogen synthesis. May also mediate the development of insulin resistance by regulating activation of transcription factors. Regulates protein synthesis by controlling the activity of initiation factor 2B (EIF2BE/EIF2B5) in the same manner as glycogen synthase. In Wnt signaling, GSK3B forms a multimeric complex with APC, AXIN1 and CTNNB1/beta-catenin and phosphorylates the N-terminus of CTNNB1 leading to its degradation mediated by ubiquitin/proteasomes. Phosphorylates JUN at sites proximal to its DNA-binding domain, thereby reducing its affinity for DNA. Phosphorylates NFATC1/NFATC on conserved serine residues promoting NFATC1/NFATC nuclear export, shutting off NFATC1/NFATC gene regulation, and thereby opposing the action of calcineurin. Phosphorylates MAPT/TAU on 'Thr-548', decreasing significantly MAPT/TAU ability to bind and stabilize microtubules. MAPT/TAU is the principal component of neurofibrillary tangles in Alzheimer disease. Plays an important role in ERBB2-dependent stabilization of microtubules at the cell cortex. Phosphorylates MACF1, inhibiting its binding to microtubules which is critical for its role in bulge stem cell migration and skin wound repair. Probably regulates NF-kappa-B (NFKB1) at the transcriptional level and is required for the NF-kappa-B-mediated anti-apoptotic response to TNF-alpha (TNF/TNFA). Negatively regulates replication in pancreatic beta-cells, resulting in apoptosis, loss of beta-cells and diabetes. Through phosphorylation of the anti-apoptotic protein MCL1, may control cell apoptosis in response to growth factors deprivation. Phosphorylates MUC1 in breast cancer cells, decreasing the interaction of MUC1 with CTNNB1/beta-catenin. Is necessary for the establishment of neuronal polarity and axon outgrowth. Phosphorylates MARK2, leading to inhibit its activity. Phosphorylates SIK1 at 'Thr-182', leading to sustain its activity. Phosphorylates ZC3HAV1 which enhances its antiviral activity. Phosphorylates SNAI1, leading to its BTRC-triggered ubiquitination and proteasomal degradation. Phosphorylates SFPQ at 'Thr-687' upon T-cell activation. Phosphorylates NR1D1 st 'Ser-55' and 'Ser-59' and stabilizes it by protecting it from proteasomal degradation. Regulates the circadian clock via phosphorylation of the major clock components including ARNTL/BMAL1, CLOCK and PER2. Phosphorylates CLOCK AT 'Ser-427' and targets it for proteasomal degradation. Phosphorylates ARNTL/BMAL1 at 'Ser-17' and 'Ser-21' and primes it for ubiquitination and proteasomal degradation. Phosphorylates OGT at 'Ser-3' or 'Ser-4' which positively regulates its activity. Phosphorylates MYCN in neuroblastoma cells which may promote its degradation (PubMed:24391509).
Gene Name:
GSK3B
Uniprot ID:
P49841
Molecular Weight:
46743.865 Da
Binding/Activity Constants
TypeValueAssay TypeAssay Source
IC505 uMNot AvailableBindingDB 7875
References
  1. Perez DI, Palomo V, Perez C, Gil C, Dans PD, Luque FJ, Conde S, Martinez A: Switching reversibility to irreversibility in glycogen synthase kinase 3 inhibitors: clues for specific design of new compounds. J Med Chem. 2011 Jun 23;54(12):4042-56. doi: 10.1021/jm1016279. Epub 2011 May 17. [21500862 ]
General Function:
Zinc ion binding
Specific Function:
Tyrosine-protein phosphatase which acts as a regulator of endoplasmic reticulum unfolded protein response. Mediates dephosphorylation of EIF2AK3/PERK; inactivating the protein kinase activity of EIF2AK3/PERK. May play an important role in CKII- and p60c-src-induced signal transduction cascades. May regulate the EFNA5-EPHA3 signaling pathway which modulates cell reorganization and cell-cell repulsion. May also regulate the hepatocyte growth factor receptor signaling pathway through dephosphorylation of MET.
Gene Name:
PTPN1
Uniprot ID:
P18031
Molecular Weight:
49966.44 Da
Binding/Activity Constants
TypeValueAssay TypeAssay Source
Inhibitory81 uMNot AvailableBindingDB 7875
References
  1. Arabaci G, Yi T, Fu H, Porter ME, Beebe KD, Pei D: alpha-bromoacetophenone derivatives as neutral protein tyrosine phosphatase inhibitors: structure-Activity relationship. Bioorg Med Chem Lett. 2002 Nov 4;12(21):3047-50. [12372498 ]