Record Information |
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Version | 2.0 |
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Creation Date | 2009-06-17 23:53:01 UTC |
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Update Date | 2014-12-24 20:22:57 UTC |
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Accession Number | T3D0928 |
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Identification |
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Common Name | Benomyl |
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Class | Small Molecule |
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Description | Benomyl (also marketed as Benlate) is a fungicide introduced in 1968 by DuPont. It is a systemic benzimidazole fungicide that is selectively toxic to microorganisms and invertebrates, especially earthworms. Benomyl binds to microtubules, interfering with cell functions, such as meiosis and intracellular transportation. The selective toxicity of benomyl as a fungicide is possibly due to its heightened effect on fungal rather than mammalian microtubules. Due to the development and worldwide prevalence of resistance of parasitic fungi to benomyl, it and similar pesticide compounds became largely ineffective. |
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Compound Type | - Amine
- Carbamate
- Ester
- Ether
- Food Toxin
- Lachrymator
- Metabolite
- Organic Compound
- Pesticide
- Synthetic Compound
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Chemical Structure | |
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Synonyms | Synonym | 1-(Butylcarbamoyl)-2-benzimidazol-methylcarbamat | 1-(N-Butylcarbamoyl)-2-(methoxy-carboxamido)-benzimidazol | Agrocit | Arbortrine | Arilate | BBC | Benex | Benlat | Benlate | Benlate 50 | Benlate 50 W | Benlate 50W | Benomil | Benomyl 50W | Benomyl-imex | Benosan | BNM | Chinoin-fundazol | Du Pont 1991 | Dupont 1991 | Fibenzol | Fundasol | Fundazol | Fundazol 50WP | Fungicide 1991 | Fungicide D-1991 | Fungochrom | Kribenomy | Kribenomyl | MBCL | Methyl 1-(butylamino)carbonyl-1H-benzimidazol-2-ylcarbamate | Methyl 1-(butylcarbamoyl)-2-benzimidazolecarbamate | Methyl 1-(butylcarbamoyl)-2-benzimidazolylcarbamate | Methyl 1-(butylcarbamoyl)benzimidazol-2-ylcarbamate | Methyl 1-[(butylamino)carbonyl]-1H-benzimidazol-2-ylcarbamate, 9CI | Methyl N-(1-butylcarbamoyl-2-benzimidazole)carbamate | Methyl [1-(butylcarbamoyl)-1H-benzimidazol-2-yl]carbamate | NS 02 (fungicide) | Tersan 1991 | Uzgen |
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Chemical Formula | C14H18N4O3 |
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Average Molecular Mass | 290.318 g/mol |
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Monoisotopic Mass | 290.138 g/mol |
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CAS Registry Number | 17804-35-2 |
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IUPAC Name | N-butyl-2-{[hydroxy(methoxy)methylidene]amino}-1H-1,3-benzodiazole-1-carboximidic acid |
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Traditional Name | benomyl |
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SMILES | CCCCN=C(O)N1C(N=C(O)OC)=NC2=CC=CC=C12 |
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InChI Identifier | InChI=1S/C14H18N4O3/c1-3-4-9-15-13(19)18-11-8-6-5-7-10(11)16-12(18)17-14(20)21-2/h5-8H,3-4,9H2,1-2H3,(H,15,19)(H,16,17,20) |
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InChI Key | InChIKey=RIOXQFHNBCKOKP-UHFFFAOYSA-N |
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Chemical Taxonomy |
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Description | belongs to the class of organic compounds known as 2-benzimidazolylcarbamic acid esters. These are aromatic heteropolycyclic compounds that contain a carbamic acid ester group, which is N-linked to the C2-atom of a benzimidazole moiety. |
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Kingdom | Organic compounds |
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Super Class | Organoheterocyclic compounds |
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Class | Benzimidazoles |
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Sub Class | 2-benzimidazolylcarbamic acid esters |
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Direct Parent | 2-benzimidazolylcarbamic acid esters |
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Alternative Parents | |
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Substituents | - 2-benzimidazolylcarbamic acid ester
- Imidazole-1-carbonyl group
- N-substituted imidazole
- Benzenoid
- Azole
- Imidazole
- Carbamic acid ester
- Heteroaromatic compound
- Urea
- Carbonic acid derivative
- Azacycle
- Organopnictogen compound
- Carbonyl group
- Organooxygen compound
- Organonitrogen compound
- Organic oxygen compound
- Organic nitrogen compound
- Hydrocarbon derivative
- Organic oxide
- Aromatic heteropolycyclic compound
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Molecular Framework | Aromatic heteropolycyclic compounds |
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External Descriptors | |
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Biological Properties |
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Status | Detected and Not Quantified |
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Origin | Exogenous |
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Cellular Locations | - Cytoplasm
- Extracellular
- Membrane
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Biofluid Locations | Not Available |
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Tissue Locations | Not Available |
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Pathways | Not Available |
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Applications | |
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Biological Roles | |
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Chemical Roles | Not Available |
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Physical Properties |
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State | Solid |
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Appearance | White powder. |
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Experimental Properties | Property | Value |
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Melting Point | 140°C | Boiling Point | Not Available | Solubility | 0.0038 mg/mL at 20°C | LogP | 2.12 |
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Predicted Properties | |
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Spectra |
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Spectra | Spectrum Type | Description | Splash Key | Deposition Date | View |
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Predicted GC-MS | Predicted GC-MS Spectrum - GC-MS (Non-derivatized) - 70eV, Positive | splash10-0006-8890000000-e030c9d552fc5c7d52da | 2017-09-01 | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - GC-MS (2 TMS) - 70eV, Positive | splash10-044i-9055500000-3eca627722374bbbc14c | 2017-10-06 | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 10V, Positive | splash10-0006-2790000000-f3ed3b88d515aed07a44 | 2016-08-02 | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 20V, Positive | splash10-01qc-1900000000-97b4102ec19aeb0c6974 | 2016-08-02 | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 40V, Positive | splash10-001i-2900000000-1aa81e2473687dd33506 | 2016-08-02 | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 10V, Negative | splash10-0a4l-2930000000-e8acc050770f45adf536 | 2016-08-03 | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 20V, Negative | splash10-0a4l-4960000000-e995e6dd540486a3ceb2 | 2016-08-03 | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 40V, Negative | splash10-05ai-1900000000-c2b1949df8a55a1f654a | 2016-08-03 | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 10V, Positive | splash10-0006-0910000000-66be9480198a5327e735 | 2021-09-22 | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 20V, Positive | splash10-03di-0900000000-0c18c5b071a4b09c0c8e | 2021-09-22 | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 40V, Positive | splash10-03di-2910000000-cd123ee8bdd6c595e223 | 2021-09-22 | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 10V, Negative | splash10-0a4i-4980000000-13f898af5a45ad5b3402 | 2021-09-22 | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 20V, Negative | splash10-0cdi-1940000000-70fa20da8fb0758e3219 | 2021-09-22 | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 40V, Negative | splash10-0536-6910000000-3b461f008e97c4b1b708 | 2021-09-22 | View Spectrum | MS | Mass Spectrum (Electron Ionization) | splash10-052f-7900000000-930ea348a291d67fe037 | 2014-09-20 | View Spectrum |
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Toxicity Profile |
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Route of Exposure | Inhalation (5) ; oral (5); dermal (5) |
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Mechanism of Toxicity | Benomyl targets beta tubulin in actively dividing cells. It binds to microtubules, interfering with cell functions, such as meiosis and intracellular transportation (2). Benomyl binds to brain tubulin with a dissociation constant of 11.9 +/- 1.2 microM. Further, benomyl binds to a novel tubulin beta binding site, distinct from the well-characterized colchicine and vinblastine binding sites. Benomyl inhibits the polymerization of brain tubulin into microtubules, with 50% inhibition occurring at a concentration of 70-75 microM (3) |
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Metabolism | Not Available |
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Toxicity Values | Benomyl is of such a low toxicity to mammals, it has been impossible to administer doses large enough to establish an LD50. It has an arbitrary LD50 of "greater than 10,000 mg/kg/day for rats". |
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Lethal Dose | Not Available |
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Carcinogenicity (IARC Classification) | No indication of carcinogenicity to humans (not listed by IARC). |
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Uses/Sources | It is a systemic fungicide that is selectively toxic to microorganisms and invertebrates. It is also employed as a casting worm control agent in amenity turf situations such as golf greens and tennis courts. It is also used to control plant diseases in cereals and fruits, including citrus, bananas, strawberries, pineapples, and pomes.
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Minimum Risk Level | The Occupational Safety and Health Administration has set a permissible exposure limit of 15 mg/m3 for total exposure over an eight-hour time-weighted average.
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Health Effects | Skin irritation may occur through industrial exposure, and florists, mushroom pickers and floriculturists have reported allergic reactions to benomyl. Benomyl is a potential teratogen. Studies have shown eye defects can occur at relatively high doses. A test in which rats were dosed orally demonstrated evidence of microphthalmia at dose levels of 62.5 mg/kg and above. In 1996, a Miami jury awarded US$ 4 million to a child whose mother was exposed in pregnancy to Benomyl. The child was born without eyes. The mother had been exposed to an unusually high dose of Benomyl through her occupation, during pregnancy.
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Symptoms | Skin redness and skin irritation. Fetuses exposed to high levels may exhibit microphthalmia (small eyes) or anaphthalmia (no eyes).
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Treatment | For acute exposures and first aid: EYES: irrigate opened eyes for several minutes under running water. INGESTION: do not induce vomiting. Rinse mouth with water (never give anything by mouth to an unconscious person). Seek immediate medical advice. SKIN: should be treated immediately by rinsing the affected parts in cold running water for at least 15 minutes, followed by thorough washing with soap and water. If necessary, the person should shower and change contaminated clothing and shoes, and then must seek medical attention. INHALATION: supply fresh air. If required provide artificial respiration. |
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Normal Concentrations |
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| Not Available |
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Abnormal Concentrations |
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| Not Available |
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External Links |
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DrugBank ID | Not Available |
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HMDB ID | HMDB31767 |
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PubChem Compound ID | 28780 |
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ChEMBL ID | CHEMBL327919 |
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ChemSpider ID | 26771 |
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KEGG ID | C10896 |
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UniProt ID | Not Available |
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OMIM ID | |
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ChEBI ID | 3015 |
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BioCyc ID | Not Available |
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CTD ID | D001542 |
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Stitch ID | Benomyl |
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PDB ID | Not Available |
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ACToR ID | 5798 |
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Wikipedia Link | Not Available |
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References |
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Synthesis Reference | Not Available |
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MSDS | T3D0928.pdf |
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General References | - Edlind TD, Bartlett MS, Smith JW: Characterization of the beta-tubulin gene of Pneumocystis carinii. J Protozool. 1991 Nov-Dec;38(6):62S-63S. [1818208 ]
- Clement MJ, Rathinasamy K, Adjadj E, Toma F, Curmi PA, Panda D: Benomyl and colchicine synergistically inhibit cell proliferation and mitosis: evidence of distinct binding sites for these agents in tubulin. Biochemistry. 2008 Dec 9;47(49):13016-25. doi: 10.1021/bi801136q. [19049291 ]
- Gupta K, Bishop J, Peck A, Brown J, Wilson L, Panda D. "Antimitotic antifungal compound benomyl inhibits brain microtubule polymerization and dynamics and cancer cell proliferation at mitosis, by binding to a novel site in tubulin.". Biochemistry. 2004 Jun 1;43(21):6645-55. [15157098 ]
- Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.
- IPCS Intox Database (1987). Antimony pentoxide. [Link]
- Fishel F (2009). Pesticide Toxicity Profile: Carbamate Pesticides. University of Florida, IFAS Extension. [Link]
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Gene Regulation |
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Up-Regulated Genes | Gene | Gene Symbol | Gene ID | Interaction | Chromosome | Details |
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Down-Regulated Genes | Not Available |
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